Merge pull request 'clan: Fix treefmt not applying mypy lints on clan_cli and clan_app' (#1777) from Qubasa/clan-core:Qubasa-main into main

formatter.nix

@@ -13,10 +13,16 @@
       treefmt.programs.deadnix.enable = true;
 
       treefmt.programs.mypy.directories = {
-        "pkgs/clan-cli".extraPythonPackages = self'.packages.clan-cli.testDependencies;
-        "pkgs/clan-app".extraPythonPackages =
-          # clan-app currently only exists on linux
-          (self'.packages.clan-app.externalTestDeps or [ ]) ++ self'.packages.clan-cli.testDependencies;
+        "pkgs/clan-cli" = {
+          extraPythonPackages = self'.packages.clan-cli.testDependencies;
+          modules = [ "clan_cli" ];
+        };
+        "pkgs/clan-app" = {
+          extraPythonPackages =
+            # clan-app currently only exists on linux
+            (self'.packages.clan-app.externalTestDeps or [ ]) ++ self'.packages.clan-cli.testDependencies;
+          modules = [ "clan_app" ];
+        };
       };
       treefmt.programs.ruff.check = true;
       treefmt.programs.ruff.format = true;

pkgs/clan-app/pyproject.toml

@@ -40,6 +40,9 @@ no_implicit_optional = true
 module = "argcomplete.*"
 ignore_missing_imports = true
 
+[[tool.mypy.overrides]]
+module = "clan_cli.*"
+ignore_missing_imports = true
 
 [tool.ruff]
 target-version = "py312"

pkgs/clan-cli/clan_cli/vars/generate.py

@@ -8,6 +8,7 @@ from collections.abc import Callable
 from graphlib import TopologicalSorter
 from pathlib import Path
 from tempfile import TemporaryDirectory
+from typing import Any
 
 from clan_cli.cmd import run
 
@@ -71,7 +72,7 @@ def decrypt_dependencies(
 ) -> dict[str, dict[str, bytes]]:
     generator = machine.vars_generators[generator_name]
     dependencies = set(generator["dependencies"])
-    decrypted_dependencies = {}
+    decrypted_dependencies: dict[str, Any] = {}
     for dep_generator in dependencies:
         decrypted_dependencies[dep_generator] = {}
         dep_files = machine.vars_generators[dep_generator]["files"]
@@ -242,6 +243,7 @@ def _generate_vars_for_machine(
     # process generators in topological order
     sorter = TopologicalSorter(graph)
     for generator_name in sorter.static_order():
+        assert generator_name is not None
         machine_updated |= execute_generator(
             machine=machine,
             generator_name=generator_name,